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DFTMethod

The DFTMethod object specifies the settings for using density functional theory (DFT) as the method for a calculation.

There are two required fields for creating a DFTMethod object:

  • ao for specifying the atomic-orbital basis set
  • xc for specifying the exchange-correlation functional

All other calculation details such as SCF convergence criteria can be specified in the details dictionary.

Example

The following examples demonstrate how to create and use DFTMethod with the EnergyInput build block to calculate energies of molecules.

import sierra
from sierra.inputs import *

# Create a water molecule from pubchem (internet connection required)
water = Molecule(pubchem="water")

# Perform a single-point energy calculation at PBE/Def2-SVP level of theory
# using default settings for the other calculation details
basic_input = EnergyInput(
    molecule=water,
    method=DFTMethod(xc="PBE", ao="def2-svp"),
)
basic_result = sierra.run(basic_input)
print(f"PBE/Def2-SVP energy: {basic_result.energy:.6f} Hartree")
#> PBE/Def2-SVP energy: -76.272541 Hartree

# Use more advanced settings for the PBE/Def2-SVP method
advanced_input = EnergyInput(
    molecule=water,
    method=DFTMethod(
        xc="PBE",
        ao="def2-svp",
        details={"max_iter": 200, "energy_threshold": 1e-8},
    ),
)
advanced_result = sierra.run(advanced_input)
print(f"PBE/Def2-SVP energy: {advanced_result.energy:.6f} Hartree")
#> PBE/Def2-SVP energy: -76.272541 Hartree

Fields

ao

Atomic-orbital basis set name.

  • Type: str
engine

The Entos Engine in which to evaluate the method with.

  • Type: EngineIdentifier
  • Default: EngineIdentifier(name='qcore', image=None)
kind
  • Type: Literal['dft', 'DFTMethod']
  • Default: 'dft'
solvation

Include effects of solvation through a continuum model.

xc

Exchange-correlation functional name.

  • Type: str
details
Details relating to the given method

Available options for details

max_iter

Maximum number of SCF iterations.

  • The type is int
  • The default is 128
  • The value must be nonnegative
energy_threshold

SCF convergence threshold using the absolute value of the energy difference between iterations.

  • The type is float
  • The default is 1e-6
  • The value must be nonnegative
orbital_grad_threshold

SCF convergence threshold using the infinity norm of the orbital gradient.

  • The type is float
  • The default is 1e-5
  • The value must be nonnegative
coulomb_method

Method for computing the Coulomb contribution to Fock matrix and energy.

  • The type is str
  • The default is incore_df
  • The value must be one of:
    • incore_df -

      Use conventional incore density-fitting to compute the Coulomb contribution to Fock matrix and energy.

      This algorithm is fast but has a memory requirement of about \(8 * N_\text{ao}^2 * N_\text{df}\) Bytes, where \(N_\text{ao}\) and \(N_\text{df}\) are the number of AO and density-fitting basis functions, respectively. Therefore, it may not work for calculations on very large systems or with very large basis; in these cases, use coulomb_method = direct_df instead.

    • direct_df -

      Use integral-direct density-fitting to compute the Coulomb contribution to Fock matrix and energy.

      This algorithm has minimal memory requirement but is generally slower than the incore_df method. Use it when coulomb_method = incore_df does not work.

      This method also indicates use of integral screening (see schwarz_threshold) and incremental Fock build (see incremental_fock).

    • direct_4idx -

      Use integral-direct approach to compute the 4-index electron repulsion integrals (ERIs).

      Currently, this algorithm is very slow, and is recommended to be used only for testing purposes (on small systems with small basis).

exchange_method

Method for computing the exact exchange contribution to Fock matrix and energy.

  • The type is str
  • The default is pre_transformed_df
  • The value must be one of:
    • incore_df -

      Use conventional incore density-fitting to compute the exchange contribution to Fock matrix and energy.

      This algorithm is fast but has a memory requirement of about \(8 * N_\text{ao}^2 * N_\text{df}\) Bytes, where \(N_\text{ao}\) and \(N_\text{df}\) are the number of AO and density-fitting basis functions, respectively. Therefore, it may not work for calculations on very large systems or with very large basis; in these cases, use coulomb_method = direct_df instead.

    • pre_transformed_df -

      Use the pre-transformed density-fitting integrals to compute the exact exchange contribution to Fock matrix and energy.

      This algorithm is faster than incore_df when SCF converges slowly (ca. with more than 10 SCF steps), and the speepup increases with the number of SCF steps; but is slower when SCF converges within a few steps.

      This algorithm has the same memory requirement as incore_df.

    • occupied_df -

      Use the occ-RI-K algorithm (incore version) to compute the exact exchange contribution to Fock matrix and energy.

      This algorithm is ~ 2 times faster than incore_df for normal calculations (e.g. with double-zeta AO basis), and the speedup increases when larger basis is used.

      See this paper for a detailed description of the algorithm.

      This algorithm has the same memory requirement as incore_df.

level_shift

Turn on level shifting to improve SCF convergence. Raises the energy of virtual orbitals by level shifting value. The level shift is removed at the end of the calculation.

  • The type is float
  • The default is 0
  • The value must be nonnegative
temperature

Specify the temperature for the electrons and perform the SCF calculation in the canonical-ensemble. Convergence is often poor with the default convergence settings, and using the original Pulay DIIS method is recommended (see diis option).

  • The type is a temperature quantity, i.e. a string consisting of a number and a temperature unit.
  • The default is 0 kelvin
diis

Method of DIIS.

List of avaliable functionals

  • HF - 100% exact exchange, i.e. Hartree-Fock theory
  • Hartree - No exchange-correlation, i.e. Hartree theory
  • SVWN - Local density approximation (SLATER + VWN)
  • LDA - Local density approximation (SLATER + VWN)
  • BLYP - Combination of B88 and LYP
  • BLYPD3 - Combination of B88 and LYP and D3 dispersion correction
  • BPW91 - Combination of B88 and PW91
  • B3LYP - B3LYP with VWN5 functional
  • B3LYPD3 - B3LYP with VWN5 functional and D3 dispersion correction
  • B3LYP3 - B3LYP with VWN3 functional (as implemented in Gaussian)
  • B3LYP3D3 - B3LYP with VWN3 functional (as implemented in Gaussian) and D3 dispersion correction
  • B3LYP5 - B3LYP with VWN5 functional
  • PBE - Perdew, Burke, Ernzerhof exchange-correlation (PBEX + PBEC)
  • PBED3 - Perdew, Burke, Ernzerhof exchange-correlation (PBEX + PBEC) and D3 dispersion correction
  • PBE0 - PBE hybrid exchange-correlation
  • PBE0D3 - PBE hybrid exchange-correlation and D3 dispersion correction
  • B97-3c - B97-3c from Brandenburg, Bannwarth, Hansen and Grimme doi: 10.1063/1.5012601. Note that this functional automatically selects the basis set ao = mTZVP.
  • wB97X - Chai and Head-Gordon long-range corrected hybrid density functional
  • wB97XD3 - Lin, Li, Mao and Chai long-range corrected hybrid density functional and D3 dispersion correction
  • CAMB3LYP - Cambridge screened hybrid
  • CAMB3LYPD3 - Cambridge screened hybrid and D3 dispersion correction
  • B88 - Becke 1988 exchange
  • DIRAC - Slater-Dirac exchange
  • LYP - Lee, Yang, Parr correlation
  • P86 - Perdew 1986 correlation
  • PBE1PBE - PBE hybrid exchange-correlation. Note: this is synonymous with the better-known PBE0 functional
  • PBE1PBED3 - PBE hybrid exchange-correlation and D3 dispersion correction. Note: this is synonymous with the better-known PBE0 functional
  • PBEC - Perdew, Burke, Ernzerhof correlation
  • PBER - Perdew, Burke, Ernzerhof revised exchange-correlation (PBERX + PBEC). Also known as revPBE
  • PBERD3 - Perdew, Burke, Ernzerhof revised exchange-correlation (PBERX + PBEC) and D3 dispersion correction. Also known as revPBE
  • PBEX - Perdew, Burke, Ernzerhof exchange
  • PBERX - Perdew, Burke, Ernzerhof exchange (revised)
  • PW91 - Perdew, Wang 1991 correlation
  • SLATER - Slater-Dirac exchange
  • VWN - Vosko, Wilk, Nussair (5)
  • VWN1 - Vosko, Wilk, Nussair (1)
  • VWN5 - Vosko, Wilk, Nussair (5)
  • XCHBLYPUW12 - Original XCH-BLYP-UW12 hybrid functional
  • BLYPOSUW12 - Opposite-spin B-LYP-osUW12 hybrid functional
  • FBLYPOSUW12 - Opposite-spin fB-LYP-osUW12 hybrid functional with 75% exact exchange
  • BLYPOSUW12D3BJ - Opposite-spin dispersion-optimised B-LYP-osUW12-D3BJ hybrid functional
  • XCHBLYPUW12D3BJ - Dispersion-corrected XCH-BLYP-UW12-D3BJ hybrid functional

List of avaliable basis sets

  • 3-21++G
  • 3-21G
  • 3-21GSP
  • 4-31G
  • 6-31++G
  • 6-31++G*
  • 6-31++G**
  • 6-31+G
  • 6-31+G*
  • 6-31+G**
  • 6-311++G
  • 6-311++G(2d,2p)
  • 6-311++G(3df,3pd)
  • 6-311++G*
  • 6-311++G**
  • 6-311+G
  • 6-311+G(2d,p)
  • 6-311+G*
  • 6-311+G**
  • 6-311G
  • 6-311G(2df,2pd)
  • 6-311G*
  • 6-311G**
  • 6-31G
  • 6-31G(2df,p)
  • 6-31G(3df,3pd)
  • 6-31G*
  • 6-31G**
  • DZP
  • DZP-DKH
  • Def2-QZVP
  • Def2-QZVPD
  • Def2-QZVPP
  • Def2-QZVPPD
  • Def2-SVP
  • Def2-TZVP
  • Def2-TZVPD
  • Def2-TZVPP
  • Def2-TZVPPD
  • STO-2G
  • STO-3G
  • STO-6G
  • aug-cc-pVDZ
  • aug-cc-pVTZ
  • aug-pc-0
  • aug-pc-1
  • aug-pc-2
  • aug-pc-3
  • aug-pcseg-0
  • aug-pcseg-1
  • aug-pcseg-2
  • aug-pcseg-3
  • cc-pVDZ
  • cc-pVQZ
  • cc-pVTZ
  • heavy-aug-cc-pVDZ
  • heavy-aug-cc-pVTZ
  • mTZVP
  • pc-0
  • pc-1
  • pc-2
  • pc-3
  • pcseg-0
  • pcseg-1
  • pcseg-2
  • pcseg-3